Index

A

abp_n4() (in module ants) abs() (ants.core.ants_image.ANTsImage method) affine_initializer() (in module ants) ants (module), [1], [2], [3], [4], [5] ANTsImage (class in ants.core.ants_image) ANTsImageToImageMetric (class in ants.core.ants_metric) ANTsTransform (class in ants.core.ants_transform) apply() (ants.core.ants_image.ANTsImage method) (ants.core.ants_transform.ANTsTransform method)

apply_to_image() (ants.core.ants_transform.ANTsTransform method) apply_to_point() (ants.core.ants_transform.ANTsTransform method) apply_to_vector() (ants.core.ants_transform.ANTsTransform method) apply_transforms() (in module ants) argmax() (ants.core.ants_image.ANTsImage method) argmin() (ants.core.ants_image.ANTsImage method) argrange() (ants.core.ants_image.ANTsImage method) astype() (ants.core.ants_image.ANTsImage method) atropos() (in module ants)

C

clone() (ants.core.ants_image.ANTsImage method) convolve_image() (in module ants) copy() (ants.core.ants_image.ANTsImage method) create_ants_metric() (in module ants)

create_ants_transform() (in module ants) create_jacobian_determinant_image() (in module ants) create_warped_grid() (in module ants) crop_image() (in module ants) crop_indices() (in module ants)

D

decrop_image() (in module ants)

denoise_image() (in module ants) direction (ants.core.ants_image.ANTsImage attribute)

E

eig_seg() (in module ants)

F

fixed_parameters (ants.core.ants_transform.ANTsTransform attribute) flatten() (ants.core.ants_image.ANTsImage method)

from_numpy() (in module ants) fsl2antstransform() (in module ants)

G

get_ants_data() (in module ants) get_center_of_mass() (in module ants)

get_centroids() (in module ants) get_mask() (in module ants) get_pointer_string() (in module ants)

I

image_clone() (in module ants) image_header_info() (in module ants) image_list_to_matrix() (in module ants) image_mutual_information() (in module ants) image_read() (in module ants) image_similarity() (in module ants) image_to_cluster_images() (in module ants)

image_write() (in module ants) images_from_matrix() (in module ants) images_to_matrix() (in module ants) iMath() (in module ants) impute() (in module ants) initialize_eigenanatomy() (in module ants) invariant_image_similarity() (in module ants) invert() (ants.core.ants_transform.ANTsTransform method)

J

joint_label_fusion() (in module ants)

K

kelly_kapowski() (in module ants)

kmeans_segmentation() (in module ants)

L

label_clusters() (in module ants)

label_geometry_measures() (in module ants) label_image_centroids() (in module ants)

M

make_image() (in module ants) mask_image() (in module ants) matrix_from_images() (in module ants) matrix_to_images() (in module ants) max() (ants.core.ants_image.ANTsImage method)

mean() (ants.core.ants_image.ANTsImage method) median() (ants.core.ants_image.ANTsImage method) merge_channels() (in module ants) min() (ants.core.ants_image.ANTsImage method) mni2tal() (in module ants) morphology() (in module ants)

N

n3_bias_field_correction() (in module ants) n4_bias_field_correction() (in module ants) new_ants_metric() (in module ants)

new_ants_transform() (in module ants) new_image_like() (ants.core.ants_image.ANTsImage method) nonzero() (ants.core.ants_image.ANTsImage method) numpy() (ants.core.ants_image.ANTsImage method)

O

origin (ants.core.ants_image.ANTsImage attribute)

P

parameters (ants.core.ants_transform.ANTsTransform attribute)

plot() (in module ants) prior_based_segmentation() (in module ants)

R

range() (ants.core.ants_image.ANTsImage method) read_transform() (in module ants) reflect_image() (in module ants) registration() (in module ants)

render_surface_function() (in module ants) reorient_image() (in module ants) resample_image() (in module ants) resample_image_to_target() (in module ants)

S

set_direction() (ants.core.ants_image.ANTsImage method) set_fixed_image() (ants.core.ants_metric.ANTsImageToImageMetric method) set_fixed_mask() (ants.core.ants_metric.ANTsImageToImageMetric method) set_fixed_parameters() (ants.core.ants_transform.ANTsTransform method) set_moving_image() (ants.core.ants_metric.ANTsImageToImageMetric method) set_moving_mask() (ants.core.ants_metric.ANTsImageToImageMetric method) set_origin() (ants.core.ants_image.ANTsImage method) set_parameters() (ants.core.ants_transform.ANTsTransform method)

set_spacing() (ants.core.ants_image.ANTsImage method) smooth_image() (in module ants) spacing (ants.core.ants_image.ANTsImage attribute) sparse_decom2() (in module ants) split_channels() (in module ants) std() (ants.core.ants_image.ANTsImage method) sum() (ants.core.ants_image.ANTsImage method) supported_metrics() (in module ants) surf() (in module ants)

T

threshold_image() (in module ants) to_file() (ants.core.ants_image.ANTsImage method)

to_filename() (ants.core.ants_image.ANTsImage method) transform_from_displacement_field() (in module ants)

U

unique() (ants.core.ants_image.ANTsImage method)

V

view() (ants.core.ants_image.ANTsImage method)

vol() (in module ants)

W

weingarten_image_curvature() (in module ants)

write_transform() (in module ants)