ants.ops.reorient_image

Functions

get_center_of_mass(image)	Compute an image center of mass in physical space which is defined as the mean of the intensity weighted voxel coordinate system.
get_orientation(image)
get_possible_orientations()
reorient_image2(image[, orientation])	Reorient an image.

get_center_of_mass(image)

Compute an image center of mass in physical space which is defined as the mean of the intensity weighted voxel coordinate system.

ANTsR function: getCenterOfMass

Parameters:

image (ants.core.ANTsImage) – image from which center of mass will be computed

Return type:

scalar

Example

>>> fi = ants.image_read( ants.get_ants_data("r16"))
>>> com1 = ants.get_center_of_mass( fi )
>>> fi = ants.image_read( ants.get_ants_data("r64"))
>>> com2 = ants.get_center_of_mass( fi )

get_orientation(image)

get_possible_orientations()

reorient_image2(image, orientation='RAS')

Reorient an image. .. rubric:: Example

>>> import ants
>>> mni = ants.image_read(ants.get_data('mni'))
>>> mni2 = mni.reorient_image2()